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Chemically rich seaweeds poison corals when not
controlled by herbivores
Douglas B. Rasher and Mark E. Hay1

School of Biology, Georgia Institute of Technology, Atlanta, GA 30332

Edited by Robert E. Ricklefs, University of Missouri, St. Louis, MO, and approved February 16, 2010 (received for review October 20, 2009)

Coral reefs are in dramatic global decline, with seaweeds commonly
replacing corals. It is unclear, however, whether seaweeds harm
corals directly or colonize opportunistically following their decline
and then suppress coral recruitment. In the Caribbean and tropical
Pacific, we show that, when protected from herbivores, ∼40 to 70%
of common seaweeds cause bleaching and death of coral tissue
when in direct contact. For seaweeds that harmed coral tissues,
their lipid-soluble extracts also produced rapid bleaching. Coral
bleaching and mortality was limited to areas of direct contact with
seaweeds or their extracts. These patterns suggest that allelopathic
seaweed-coral interactions can be important on reefs lacking her-
bivore control of seaweeds, and that these interactions involve
lipid-soluble metabolites transferred via direct contact. Seaweeds
were rapidly consumed when placed on a Pacific reef protected
from fishing but were left intact or consumed at slower rates on
an adjacent fished reef, indicating that herbivory will suppress sea-
weeds and lower frequency of allelopathic damage to corals if reefs
retain intact food webs. With continued removal of herbivores
from coral reefs, seaweeds are becoming more common. This occur-
rence will lead to increasing frequency of seaweed-coral contacts,
increasing allelopathic suppression of remaining corals, and con-
tinuing decline of reef corals.

allelopathy | competition | coral–seaweed–herbivore interactions | marine
chemical ecology | marine protected area

As foundation species, corals promote marine biodiversity,support a multitude of ecosystem functions, and provide
goods and services critical to human societies (1, 2). However,
coral reefs are in global decline, with reefs commonly converting
from species-rich and topographically complex communities
dominated by corals to species-poor and topographically sim-
plified communities dominated by seaweeds (3–7). In the Car-
ibbean, average cover of hard corals has declined by ∼80% in the
last 3 decades (5) and more than 30% of the world’s coral spe-
cies face elevated risk of extinction (6). Monitoring (7), field
experiments (8–10), and a meta-analysis (11) all indicate that
herbivory is critical in preventing seaweed replacement of corals.
However, the extent to which seaweeds drive these shifts by
outcompeting adult corals in the absence of herbivory, or pro-
liferate only after coral mortality is triggered by other causes
(such as disease or bleaching) is debated (12–15). To compound
this uncertainty, studies addressing seaweed-coral competition
have: (i) produced variable results, (ii) rarely been conducted
using numerous species-pairings, (iii) varied in experimental
techniques (complicating comparisons), and (iv) sometimes been
conducted in laboratory settings lacking ecologically realistic
conditions (e.g., flow and turbulence). Thus, the general impor-
tance of competition between established seaweeds and corals
remains uncertain. An understanding of mechanisms determin-
ing the outcomes of seaweed-coral interactions, and of how
herbivory mediates these interactions, is needed if reefs are to be
better managed, especially with the continuing harvest of reef
herbivores (12, 15, 16).
The importance of physical vs. chemical mechanisms affecting

seaweed-coral interactions is also unclear (13). Although smoth-
ering, shading, and abrasion by a limited number of seaweeds have

been shown to negatively (13, 17–19) or positively (20) affect corals,
chemically-mediated competition between adult corals and sea-
weeds has received limited attention. Numerous marine benthic
organisms produce secondary metabolites that function to deter
consumers or suppress competitors (21). In field studies, seaweed
secondary metabolites have been proposed as likely agents affecting
coralmortality(17,22),butonlyoneinvestigationhasdemonstrated
seaweedallelopathy(againstasoftcoral)underecologicallyrealistic
field conditions (23). In contrast, laboratory-based studies of mul-
tipleseaweed-coral pairingssuggest that release ofseaweed primary
metabolites (i.e., sugars and carbohydrates) can indirectly mediate
coral mortality through effects on coral-associated microbes (24).
These laboratory-based effects have yet to be documented under
field conditions, and a recent field study found no effect of nearby
seaweeds ontheseverity anddynamicsofamicrobe-generatedcoral
disease, suggesting that natural hydrodynamic conditions may limit
the impacts of algal generated metabolites in the field (25). Thus,
the relative frequency, intensity, and general ecological effects of
seaweed allelopathy against corals remain unknown, as do the
chemical nature and mechanisms of allelopathy between seaweeds
andcorals(e.g.,theactivityofprimaryvs.secondarymetabolitesand
the role of direct poisons vs. indirect effects on microbes).
Here, we describe field experiments in the Caribbean and

tropical Pacific designed to assess the outcomes and mechanisms
involved in seaweed-coral competition across multiple seaweed
species and functional groups. Throughout these 20-d experi-
ments, we monitored effects of seaweeds on coral bleaching,
death, and photosynthetic efficiency using photographic image
analysis and in situ pulse-amplitude modulated (PAM) fluorom-
etry, respectively. To assess the most plausible mechanism for the
patterns we observed in our experiments, we then tested the effect
of lipid-soluble extracts from each seaweed on corals (Fig. 1).
These seaweeds were then transplanted onto reefs to determine
how herbivory may mediate seaweed-coral competitive inter-
actions by limiting seaweed abundance. Our results indicate that
several common seaweeds produce lipid-soluble metabolites that
damage corals when seaweeds and corals come into direct contact.

Results
Seaweed Effects on Corals. When the coral Porites porites (Panama)
was placed in direct contact with seven common seaweeds for 20 d,
Ochtodes secundaramea, Dictyota bartayresiana, Lobophora varie-
gata, Halimeda opuntia, and Amphiroa fragillisima caused sig-
nificant bleaching relative to controls (P < 0.001, n = 9) (Fig. 2A), while Padina perindusiata or Sargassum sp. did not. Because visual assessments of coral bleaching and mortality can be subjective (26), we also analyzed the effects of seaweeds on coral photo-

Author contributions: D.B.R. and M.E.H. designed research; D.B.R. and M.E.H. performed
research; D.B.R. analyzed data; and D.B.R. and M.E.H. wrote the paper.

The authors declare no conflict of interest.

This article is a PNAS Direct Submission.

Freely available online through the PNAS open access option.
1To whom correspondence should be addressed. E-mail: mark.hay@biology.gatech.edu.

This article contains supporting information online at www.pnas.org/cgi/content/full/
0912095107/DCSupplemental.

www.pnas.org/cgi/doi/10.1073/pnas.0912095107 PNAS | May 25, 2010 | vol. 107 | no. 21 | 9683–9688

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mailto:mark.hay@biology.gatech.edu

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synthetic efficiency (effective quantum yield) using in situ PAM
fluorometry, a method that quantifies coral health in response to
environmental stressors (24, 26). Symbiont photosynthetic effi-
ciency was highly correlated with bleaching (r2 = 0.92, P < 0.001) (Fig. 3). Paralleling patterns of bleaching and mortality, O. secundaramea, D. bartayresiana, L. variegata, H. opuntia, and A. fragillisima suppressed photosynthetic efficiency of P. porites by 52 to 90% relative to controls (P < 0.001, n = 9) (Fig. 2C), while P. perindusiata and Sargassum sp. had no effects. Corals in contact with the most harmful seaweeds had effective quantum yields indicative of severe bleaching and mortality (ref. 24, and refer- ences within). Neither visual bleaching, nor suppression of pho- tosynthetic efficiency occurred on the sides of corals away from seaweed-coral contact (5–10 mm from seaweed contact; P = 0.358, n = 9). Thus, seaweeds damaged corals only in areas of direct contact. Results for tests with Porites cylindrica (Fiji) were similar to

those from Panama. When P. cylindrica was in contact with eight
common seaweeds for 20 d, Chlorodesmis fastigiata and Galax-
aura filamentosa caused significant visual bleaching, relative to
controls (P < 0.001, n = 11) (Fig. 2B), while Padina boryana, Liagora sp., Amphiroa crassa, Sargassum polycystum, and Turbinaria conoides caused no significant visual coral bleaching. Dictyota bar- tayresianacausedappreciablevisualbleaching,butdidnotstatistically differ from controls by posthoc analysis. P. cylindrica bleaching cor- related with photosynthetic efficiency (r2 = 0.86, P < 0.001) (Fig. 3), and corals in contact with harmful seaweeds had effective quantum yields indicative of severe bleaching/mortality (P < 0.001, n = 11) (Fig. 2D). In contrast, S. polycystum, T. conoides, and A. crassa had no effect on coral bleaching or photosynthetic efficiency. The seaweeds P.boryanaandLiagorasp.causedslight,butsignificantsuppressionof P. cylindrica photosynthetic efficiency (Fig. 2D) relative to controls, despite not generating significant visual bleaching (Fig. 2B). Contact with these seaweeds produced stress unrecognizable by visual assessments alone. As with P. porites in Panama, no significant visual bleaching, nor suppression of photosynthetic efficiency, occurred onthefarsidesofP.cylindricaawayfromseaweedcontact(P=0.794, n = 11). Thus, Fijian seaweeds also caused bleaching only in areas of direct contact. Seaweeds could have affected corals via abrasion, shading, or

lipid-soluble allelopathic compounds transferred by direct contact
rather than via dissolution into the water. When inert models
designed to mimic the shading and abrasion of bladed species, like

Padina, and filamentous species, like Chlorodesmis, were placed in
direct contact with P. cylindrica for 16 d in the field, Padina mimics
(0% bleaching, Y: 0.661 ± 0.011) and Chlorodesmis mimics (0%
bleaching, Y: 0.595 ± 0.027) caused no bleaching or effects on
photosynthetic efficiency (P > 0.999 and P = 0.149 for bleaching
and photosynthetic efficiency, respectively, n = 10), relative to
controls (0% bleaching, Y: 0.587 ± 0.066) (Fig. S1). Thus, physical
effects of abrasion and shading were not detectable in our
experiment.

Extract Effects on Corals. When lipid-soluble extracts from each
Panamanian seaweed were embedded at natural volumetric con-
centration in Phytagel strips and placed in direct contact with
P. porites for 24 h in the field (27) (Fig. 1C), effects of extracts
paralleled effects of direct seaweed contact; O. secundaramea,
D. bartayresiana, L. variegata, H. opuntia, and A. fragillisima caused
significant coral bleaching and suppression of photosynthetic effi-
ciency in assays using both intact seaweeds (P < 0.001, n = 9) (Fig. 2C) and chemical extracts (P < 0.001, n = 10) (Fig. 2E). Padina perindusiata and Sargassum sp. caused no significant bleaching in either assay. In Fiji, extracts from C. fastigiata, D. bartayresiana, G. fila-

mentosa, and Liagora sp. caused bleaching and suppression of
photosynthetic efficiency of P. cylindrica relative to controls (P < 0.001, n = 10) (Fig. 2F); extracts of P. boryana, A. crassa, S. polycystum, and T. conoides did not. With the exception of P. boryana, effects of Fijian seaweeds in assays using intact plants (Fig. 2D) were mirrored by effects of lipid-soluble extracts (Fig. 2F). Padina was unusual in that it suppressed effective quantum yield by 25% in whole-seaweed assays, but its extract produced no rapid allelopathic effect. It is possible that its extract acts slowly, or that the modest effect of P. boryana that we detected in our 20-d whole-plant assay was a mild effect of shading or abrasion. The effects of extracts were produced by extracting entire algal

thalli. This could be unrealistic if the allelopathic metabolites we
detected were in, but not on, seaweeds where they could be trans-
ferred to corals. When lipids were extracted from only the surfaces
of four Fijian seaweeds (28), incorporated into Phytagel strips, and
placed in contact with P. cylindrica for 24 h in the field, surface
extracts of C. fastigiata, D. bartayresiana, and G. filamentosa caused
bleaching and suppression of photosynthetic efficiency relative to
controls (P < 0.001, n = 10) (Fig. 4). In contrast, surface extracts of A. crassa, which had no effect in whole-plant assays, had no sig-

Fig. 1. Experimental design. (A) A rack holding experimental corals in cones. (B) A coral replicate showing a seaweed transplanted against a coral. (C) A coral
replicate wrapped with a gel containing the lipid-soluble extract of a seaweed.

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nificant effects. Thus, effects of surface extracts, of whole-plant
extracts, and of assays using intact plants all indicate that lipid-
soluble allelopathic metabolites occur on algal surfaces and damage
adjacent corals following direct contact.

Herbivore Effects on Seaweeds. Our experiments were performed
in a marine protected area (MPA) of Votua Village’s reef flat,
Fiji. In this MPA, coral cover is high (57 ± 3%; mean ± SEM)
and macroalgal cover is low (3 ± 1%). In contrast, the adjacent
reef flat 300 m west of the MPA is heavily fished and has low
coral (3 ± 2%) and high macroalgal cover (47 ± 5%). Cover of

both corals and macroalgae differ between sites (P < 0.001, P < 0.001, respectively, n = 10). In 2008, when we transplanted all macrophytes used in our

caged competition study into both sites, losses over 24 h in the
MPA were 40 to 100% for all species; losses in the fished area
were 0 to 40% (Fig. 5A). For all species but Chlorodesmis, rates
of grazing in the MPA were significantly higher than on the
fished reef flat. When repeated in 2009, trends were similar. Six

Fig. 3. Linear correlation between coral bleaching and photosynthetic
efficiency for both corals. Values determined for corals in direct contact with
seaweeds for 20 d (mean ± SEM; n = 9–11 per seaweed-coral treatment).
Analyzed by Pearson’s correlation coefficients.

Fig. 4. Effects of seaweed surface extracts on coral health. Photosynthetic
efficiency (Y; mean ± SEM) of Porites cylindrica in direct contact for 24 h with
gel strips containing lipid-soluble extracts from the surfaces of seaweeds (n =
10). Analyzed as in Fig. 2.

Fig. 2. Effects of intact seaweeds and extracts on coral health. (A and B) Visual coral tissue bleaching (percent 2D area; mean ± SEM) and (C–F) photo-
synthetic efficiency (Y; mean ± SEM) of the corals Porites porites in Panama and Porites cylindrica in Fiji when in contact with intact seaweeds for 20 d (A–D: n
= 9–11), or in contact with gel strips containing lipid-soluble extracts from the same seaweeds for 24 h (E and F: n = 10). Analyzed by Kruskal-Wallis ANOVA on
Ranks. Letters indicate homogeneous subgroups by posthoc Student-Newman-Kuels tests.

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of the seven species were consumed significantly more in the
MPA; Galaxaura was minimally consumed in both sites (Fig. 5B).

Discussion
In both the Caribbean and tropical Pacific, contact of seaweeds
with Porites corals commonly caused bleaching, lowered photo-
synthetic efficiency, and in several cases death of coral tissues in
areas of contact. These patterns were reproduced when corals
were in contact with only the lipophilic extracts of these seaweeds,
suggesting that seaweeds damaged corals via chemical mecha-
nisms. Our inert algal mimics produced no detectable effects on
corals, also indicating chemical instead of physical effects.
In Panama, five of seven seaweeds (71%) caused bleaching of

P. porites; in Fiji, three of eight species (38%) caused bleaching
of P. cylindrica. We commonly observed these Porites spp. in
contact with seaweeds at our field sites, suggesting that this genus
may be relatively tolerant of contacts, potentially making these
data conservative relative to other corals. As reefs are increas-
ingly depleted of herbivores that suppress seaweeds (4, 7, 12, 15,
16), coral-seaweed contacts will increase in frequency, enhancing
the damage that corals may experience from allelopathic sea-
weeds. Thus, in addition to suppressing recruitment and growth of
new corals (29), several common seaweeds (Fig. 2) can damage
adult corals using allelochemicals.
To date, the few demonstrated allelopathic interactions among

reef species all rely on transfer of metabolites via direct contact
rather than via transmission through the water (23, 27, 30), sug-
gesting that allelopathic metabolites are lipid- rather than water-
soluble and that their effects are generated by contact rather than
proximity alone. The primacy of lipids as allelopathic agents makes
evolutionary and energetic sense given the ocean’s potential to
dilute and advect water-soluble metabolites.

Although the activity of lipid extracts matched patterns from
intact algae in 93% of the interactions we investigated, physical
mechanisms, such as shading or abrasion, may be important for
some seaweed-coral interactions or for interactions lasting lon-
ger than 20 d. However, patterns of coral bleaching did not
correlate well with seaweed structure that should affect abrasion;
seaweeds that caused bleaching commonly had a soft non-
abrasive thallus (e.g., Ochtodes, Chlorodesmis, Dictyota), while
tougher, more abrasive species like Turbinaria and Sargassum did
not damage corals. Additionally, some of the most chemically
active seaweeds in Fiji (Chlorodesmis and Dictyota) produced
obvious bleached areas after only 2 d of contact; algal mimics
designed to cause abrasion and shading had no effect after 16 d
(Fig. S1). Moreover, assays using extracts from algal surfaces
alone demonstrated that allelopathic metabolites are at sufficient
surface concentrations to damage corals. Recent studies show
that multiple seaweeds deploy secondary metabolites on their
surfaces where they could play allelopathic roles (31, 32).
Although numerous seaweeds associated with degraded reefs

(e.g., Lobophora, Halimeda, Dictyota, Amphiroa) bleached corals
in our study, a few seaweeds that are common following herbi-
vore removal (Sargassum, Turbinaria, Padina) did not rapidly
damage corals. To avoid confounding density and species effects,
we deployed one seaweed thallus per replicate in our field
experiments. It is possible that our results are conservative and
that seaweeds like Sargassum, Padina, and Turbinaria may need
to grow in greater abundance or for greater lengths of time to
produce impacts on coral health. Indeed, some studies have
detected effects of Sargassum on Porites growth (via abrasion) in
< 20 d using greater seaweed abundance in treatments (18), and have found large stands of Sargassum to be associated with increased Porites mortality and decreased coral recruitment within experimental fish exclosures over longer time periods (9). Seaweeds like Dictyota that both bloom on overfished reefs (33)

and are strongly allelopathic (Fig. 2) may be especially damaging
to corals, although Dictyota species appear variable in their alle-
lopathic activities (34). Fortunately, other strongly allelopathic
species, like Chlorodesmis, Galaxaura and Ochtodes, rarely
become abundant on reefs. However, our observations of fishes
feeding on our algal transplants in Fiji indicated that a single
herbivorous fish (Siganus argenteus) was responsible for all grazing
on C. fastigiata (see also ref. 35), suggesting that suppression of
even a single herbivore species in this diverse community could
elevate risk of coral degradation via algal allelopathy.
Recent studies found that water-soluble leechates from sea-

weeds caused rapid coral mortality in the laboratory via effects on
coral-associated microbes and suggested this was because of
microbial stimulation by dissolved organic carbon (24). Our results
were consistent with seaweeds damaging corals via lipid-soluble
allelochemicals transferred during contact; we detected no near-
contact effects (i.e., on opposite side of corals just millimeters away
from seaweed contact) that might be expected if water-soluble
primary metabolites were damaging corals. Whether lipid-soluble
secondary metabolites act as direct coral poisons or via effects on
coral-associated microbes (24, 36) was not tested, but the lack of an
impact that spread beyond areas of direct contact may be most
parsimoniously explained as a direct allelochemical effect. Re-
gardless of mode of action, direct contact between corals and
several seaweeds produced allelopathic interactions that damaged
corals. Seaweed primary (dissolved organic carbon) and secondary
metabolites might also interact synergistically to harm corals, with
the importance of differing metabolites varying under different
conditions.
We conducted our competition studies using a caged design that

excluded herbivores, simulating modern reef conditions where
herbivorous fishes have been over-harvested (12, 16). When sea-
weeds from our Fijian competition study were placed in the field
within a MPA and 300 m away in a fished area, most seaweeds were

Fig. 5. Consumption of seaweeds in a marine protected area (MPA) and
adjacent fishedreef.Seaweedsconsumed (percent;mean± SEM) by herbivores
during a 24-h feeding assay on a protected (n = 20) and fished (n = 20) reef
(∼300 m apart) in 2008 (A) and 2009 (B). Stars indicate differences in the con-
sumption of a seaweed between reefs, within a year,by Mann-Whitney U tests.

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rapidly consumed in the MPA (Fig. 5) hosting a diverse herbivore
guild (37), but consumed much more slowly or at undetectable
rates on an adjacent reef subject to fishing. Several of the seaweeds
consumed in our feeding assays demonstrated potent allelopathic
activity against corals, and are known to be rich in secondary me-
tabolites that deter some reef herbivores (e.g., Dictyota, Chlor-
odesmis, Ochtodes, Halimeda). Thus, even modest harvesting of
those fishes that consume chemically rich seaweeds (10, 38) could
leadtoincreases in some ofthe most chemically damaging seaweeds
and to increasing allelopathic impacts on reef corals. Moreover,
these findings indicate that feeding complementarity (10) and high
grazing rates typical of healthy, less-fished reefs (7, 9, 15, 16), should
suppress allelopathic damage to corals by limiting seaweed abun-
dance, and thus seaweed-coral contacts.
Our results show that numerous seaweeds can damage corals

via allelochemicals. Such chemical effects could produce the
suppression of coral fecundity and recruitment noted by previous
investigators (references within ref. 29; 39) and could produce
negative feedbacks, making reef recovery less likely as seaweed
abundance increases (15). Chemically mediated seaweed-coral
competition may limit recovery of present-day coral reefs,
regardless of the factors causing initial coral decline. This will be
especially true where local factors (e.g., overfishing) interact with
global factors (e.g., climate change) to change reef community
structure over large spatial scales that limit the ability of herbi-
vores to control seaweed abundance. Information on which
seaweeds damage corals and which herbivore species best limit
these seaweeds may prove useful in better managing reef resil-
ience to facilitate recovery (4, 9, 10, 40).

Materials and Methods
Experimental Design and Study Organisms. We assessed the outcomes of, and
mechanisms involved in, seaweed-coral competition by assaying the effects
of common seaweeds in the Caribbean (Coco Point Reef, Bocas del Toro, Panama;
9°18.019’N, 82°16.350’W, June–July 2008) and tropical Pacific (Votua Reef, Viti
Levu, Fiji; 18°13.049’S, 177°42.968’E, August–September 2008) on a common
Poritesspecies coralfrom each location. Tocreate standardized units of seaweed-
coralcontact in the sameenvironmental setting, we collected6- to 8-cm branches
ofP.porites(Panama)andP.cylindrica(Fiji)andgluedthemindividuallyintosmall
cement cones (Fig. 1) with underwater epoxy (Emerkit). In each cement cone, we
embedded 4-cm nails on opposite sides of the upper surface so that the ends of a
three-strandropeholdingaseaweedcouldbeslippedovereachnailhead,tohold
theseaweedincontactwiththecoral.Weusedrepresentative-sizedindividualsof
seaweeds that were common at each site. Intact, whole thalli were used to avoid
stress compounds that might be released if seaweeds were clipped. Control corals
received a rope without macroalgae. Our transplant procedures allowed for
seaweed-coral contact representative of natural contacts observed in the field.

We interspersed treatment and control replicates (n = 10–12 for each
species) haphazardly (15 cm apart in all directions) across five racks made of
PVC (Panama) or welded metal (Fiji) frames holding metal mesh into which
the bases of the cones could be placed (Fig. 1). In Panama, the racks were
secured on a coral-dominated reef, holding corals at 4 m depth. In Fiji, racks
were secured on a coral-dominated reef flat, holding corals at 1 m depth at
low tide. Porites species were common around our racks in both sites. We
caged racks with 1-cm2-grid metal screening to exclude large herbivores, and
brushed cages every 2 d to remove fouling organisms. During routine main-
tenance, we visually noted bleaching of corals and replaced any seaweeds lost
because of wave action (happened infrequently and only in Fiji). After 20 d,
we assessed the effects of seaweed contact on coral tissue bleaching, relative
to controls, using photographic surveys. Corals with bleaching were photo-
graphed with an underwater digital camera held perpendicular to the coral
fragment. Using an in-frame scale, 2D percent-area bleaching of each repli-
cate was quantified using ImageJ (1.40, NIH) photo analysis software. Because
visual assessments of coral bleaching/mortality can be subjective (26), we also
quantified the effects of seaweed contact on coral bleaching after 20 d using
in situ PAM fluorometry. Measurements were taken at the most damaged
location of seaweed-coral contact and at the same height on the opposite side
of the coral branch. These latter measurements assessed effects on coral tis-
sues only millimeters away from affected tissues, but not in direct physical
contact with seaweeds. We sampled control corals in the same manner (at a
similar height on the side with the control rope and on the side opposite
the rope).

In these field experiments, we used the corals P. porites (Caribbean
Panama) and P. cylindrica (Fiji) because this is a pan-tropical genus common
to both sites and used in other investigations of coral-seaweed competition
(8, 17–19, 22). The seaweeds we used were (i) common-to-abundant on
these Poritid-dominated reefs, (ii) observed in contact with corals, and (iii)
representative of a range of taxonomic and morphological forms.

Algal Mimic Study. We also tested possible effects of abrasion and shading
alone using inert algal mimics. We constructed a foliose mimic of Padina by
cutting opaque fronds from black plastic bags and grouping them with
cable-tie “holdfasts” (Fig. S1C); a filamentous mimic of Chlorodesmis was
made by cutting 60 loops of Dacron line (White River Fly Shop Magibraid
Flyline Backing) into filaments and grouping them with a cable-tie “hold-
fast” (Fig. S1D). Algal mimics (n = 10 per treatment) were then inserted into
segments of three-strand rope and attached to fragments of P. cylindrica on
racks at Votua Reef, Fiji (see experimental design, above). Control corals (n =
10) were also deployed with rope segments lacking an algal mimic (Fig. S1E).
Effects of algal mimics or controls on coral bleaching were assessed after 16
d using photographic surveys and in situ PAM fluorometry as described
above (Fig. S1 A and B).

Allelochemical Bioassays. We exhaustively extracted whole tissues (20-mL
displacement volume) of each alga with 100% methanol, filtered the extract,
and removed the solvent by rotary evaporation. We resuspended each extract
in 15 mL of ethyl acetate, added it to 200 mL of water and an additional 200
mL of ethyl acetate in a 1-L separatory funnel, and obtained the lipid-soluble
fractions of each alga by collection of the ethyl acetate layer. This was
repeated three times for each sample to assure efficient partitioning. Each
lipid-soluble extract was dried by rotary evaporation and stored at −5 °C for 2
to 3 d until bioassay preparation.

For bioassays, we resuspended lipid-soluble extracts in 1 mL methanol and
added them at appropriate volumetric concentration to Phytagel (Sigma-
Aldrich) bioassay strips (1 cm2) that were formed on window screen (modified
methods of ref. 27). Control gels were created in the same manner, including
the addition of methanol, but lacking seaweed extract. Gels were refriger-
ated for 7 to 10 h until deployed in the field. For deployment, a strip (n = 10 for
each treatment) was wrapped around a coral branch and held in place by a
cable tie (Fig. 1C). After 24 h, we removed each strip and took a PAM fluor-
ometry reading under the center of each treatment and control strip.

We also extracted lipophilic metabolites from the surfaces of four Fijian
seaweeds(threeallelopathic,onenot)usingthehexanedipmethod(28)totest
if allelopathic metabolites were on seaweed surfaces at ecologically-relevant
concentrations that could produce the allelopathic effects we observed in our
whole-tissue allelochemical bioassays. Samples (20-mL displacement volume)
were collected from the field, excess water was removed in a salad-spinner,
and the alga was extracted with 100% hexanes for 30 s while vortexing (28).
We then dried each lipophilic extract under rotary evaporation, resuspended
them in 500 μL of hexanes, and added them at natural volumetric concen-
tration to Phytagel strips as described above. Controls were created in the
same manner, including the addition of hexanes, but lacking seaweed extract.
Treatment and control gel strips (n = 10 per extract) were deployed and
assayed in the same manner as the whole-tissue allelochemical bioassays.

PAM Fluorometry. PAM fluorometry was used in situ to assess the effects of
seaweeds and their extracts on coral health (effective quantum yield). PAM
fluorometry provides a more rigorous and quantifiable measure of coral
bleaching compared to visual assessments alone (24, references within ref. 26).
Effective quantum yield is a measure (unitless, ranging from 0.0–1.0) of the
efficiency of photosystem II within light-adapted photosynthetic organisms
(i.e., under ambient field conditions) (24, 26). Values for healthy corals typi-
cally range from 0.5 to 0.7 (i.e., maximum potential quantum yield), de-
pending on coral species and depth (26). Values of ∼0.0 to 0.2 are indicative of
severe bleaching and mortality (24).

We took all PAM fluorometry readings between 0900 and 1400 h, and inter-
spersed readings for all treatments and controls in time so that readings for a
treatment would not be confounded by time (and associated variance in light or
temperature). We observed low within-treatment variance (Fig. 2) for all of our
treatments and controls, indicating minimal variance because of time of sampling.

Seaweed Palatability Assays. To assess how herbivory might impact seaweeds
and thus the probability of seaweed-coral contacts, we conducted field feeding
assays in both September 2008 and August 2009 using the seaweed species from
our20-dfieldcompetitionstudyinFiji.Liagorasp.wasnotincludedin2009assays
because of its scarcity at that time. We conducted these studies in Fiji because of
closeproximityofprotectedandfishedreefs(∼300mapart),whichallowedusto

Rasher and Hay PNAS | May 25, 2010 | vol. 107 | no. 21 | 9687

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assess the survivorship of each seaweed species in the presence and absence of a
diverse herbivore guild (37). We collected each seaweed species from the same
location that we collected seaweeds for our competition study and chemical
extractions.Each year,standardizedthalli ofeachseaweed (8–9 cmheight) were
inserted 3 to 5 cmapart on a 60-cm length of three-strand rope, and deployed at
intervals of ∼5 m across a protected and fished reef (n = 20 per site) (Methods of
ref. 41). After 24 h, we visually scored seaweeds on each rope in situ as 0, 25, 50,
75, or 100%consumed, based on changes in seaweed height. Ropes at both sites
were scored by the same individual to prevent observer bias. Caged controls
were not deployed, as both sites within each location had similar topography
andhydrodynamicconditions,andseaweedsthatwere100%consumedstillhad
basal remnants in the rope that showed grazing marks from fishes. If we pulled
seaweeds from ropes (as a wave might), the entire seaweed thallus pulled free
rather than breaking off at the base; thus, we could detect no evidence ofloss to
processes other than fish feeding.

Benthic Survey. We quantified benthic cover of macrophytes and hard corals in
theVotuaMPAand300mwestoftheMPAbyrunning30-mtransectsurveys(n=
10 per site). In the middle of each site, we deployed the first transect according
to a randomly generated compass bearing, and ran subsequent transects
parallel to this initial transect. Perpendicular distances between each transect
were randomly assigned. Macrophytes and hard corals were scored (presence/
absence) at 1-m intervals along each transect to determine percent cover.

Statistical Analysis. Data from our field competition and allelochemical
bioassays violated parametric assumptions, so we evaluated them using
Kruskal-Wallis ANOVA on Ranks. When some replicates lost seaweeds or were
missed during final scoring, we randomly excluded replicates from other
treatments (1, 2) to equalize sample sizes and allow more powerful posthoc
tests that require balanced sample sizes. The algal mimic assay results were
analyzed by one-factor ANOVAs. Differences among subgroups were ana-
lyzed for all ANOVAs using Student-Newman-Kuels posthoc tests. Herbivory
assays produced ordinal data, so they were analyzed by Mann-Whitney U
tests (42). We analyzed transect data using a t test (for hard coral cover) and
a Mann-Whitney U test (for macroalgal cover).

ACKNOWLEDGMENTS. We thank the Fijian and Panamanian governments
for granting collection and research permits, the Votua Village elders for
granting local research permissions, the University of South Pacific (USP) and
Smithsonian Tropical Research Institute (STRI) for logistical support, and the
2008 STRI Algal Taxonomy Workshop and P. Skelton (USP) for identifying
seaweeds. V. Bonito, S. Engel, G. Fraser, L. Lettieri, M. Sharma, and E. Stout
provided field and laboratory assistance. This work was supported by the
National Science Foundation (DGE 0114400 and OCE 0929119), the National
Institutes of Health (U01 TW007401-01), and the Teasley Endowment to the
Georgia Institute of Technology.

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9688 | www.pnas.org/cgi/doi/10.1073/pnas.0912095107 Rasher and Hay

www.pnas.org/cgi/doi/10.1073/pnas.0912095107

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